Adaption of Simulated Annealing to Chemical Optimization Problems ( Volume 15 )

Publication series :Volume 15

Author: Kalivas   J. H.  

Publisher: Elsevier Science‎

Publication year: 1995

E-ISBN: 9780080544748

P-ISBN(Paperback): 9780444818959

P-ISBN(Hardback):  9780444818959

Subject: O6-051 Chemistry and Mathematics

Language: ENG

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Description

Optimization problems occurring regularly in chemistry, vary from selecting the best wavelength design for optimal spectroscopic concentration predictions to geometry optimization of atomic clusters and protein folding. Numerous optimization tactics have been explored to solve these problems. While most optimizers maintain the ability to locate global optima for simple problems, few are robust against local optima convergence with regard to difficult or large scale optimization problems. Simulated annealing (SA) has shown a great tolerance to local optima convergence and is often called a global optimizer. The optimizaton algorithm has found wide use in numerous areas such as engineering, computer science, communication, image recognition, operation research, physics, and biology. Recently, SA and variations thereof have shown considerable success in solving numerous chemical optimization problems. The main thrust of this book is to demonstrate the use of SA in a wide range of chemical problems.

The potentiality of SA, GSA and other modifications of SA to serve specific needs in a variety of chemical disciplines are covered. A detailed discussion on SA and GSA is given in Chapter 1, presenting the theoretical framework from which a computer program can be written by the reader. The remainder of the book describes applications of SA type algorithms to a diverse set of chemical problems. The final chapter contains an algorithm for GSA written in the MatLab programming environ

Chapter

Front Cover

pp.:  1 – 4

Copyright Page

pp.:  5 – 6

Contents

pp.:  6 – 16

Introduction

pp.:  16 – 18

Chapter 2. Comparison of algorithms for wavelength selection

pp.:  40 – 72

Chapter 3. Robust principal component analysis and constrained background bilinearization for quantitative analysis

pp.:  72 – 100

Chapter 4. Kalman filter quantitative resolution of overlapped shifted peaks after optimal alignment by simulated annealing

pp.:  100 – 126

Chapter 5. Selection of molecular descriptors for quantitative structureactivity relationships

pp.:  126 – 148

Chapter 6. Fundamentals of cluster analysis using simulated annealing

pp.:  148 – 170

Chapter 7. Classification of materials

pp.:  170 – 196

Chapter 8. Chemical batch process scheduling

pp.:  196 – 220

Chapter 9. Nuclear fuel management

pp.:  220 – 238

Chapter 10. Design of cost-effective emission control strategies

pp.:  238 – 254

Chapter 11. Determination of biexponential fluorescence lifetimes by using simulated annealing and simplex searching

pp.:  254 – 274

Chapter 12. Simulated annealing applied to crystallographic structure refinement

pp.:  274 – 296

Chapter 13. Multi-dimensional searches in macromolecular X-ray crystallography

pp.:  296 – 318

Chapter 14. Simulated annealing in the calculation of NMR structures

pp.:  318 – 344

Chapter 15. Structural models of tetrahedrally bonded amorphous materials

pp.:  344 – 366

Chapter 16. Conformational analysis of flexible molecules

pp.:  366 – 384

Chapter 17. Simulated annealing-optimal histogram applications to the protein folding problem

pp.:  384 – 410

Chapter 18. Optimization of linear and non-linear parameters in a trial wavefunction by the method of simulated annealing

pp.:  410 – 432

Chapter 19. Annealing to a moving target: first principles molecular dynamics

pp.:  432 – 460

Chapter 20. A MATLAB algorithm for optimization of an arbitrary multivariate function

pp.:  460 – 480

Epilogue

pp.:  480 – 486

Index

pp.:  486 – 490

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