Understanding Molecular Simulation :From Algorithms to Applications ( 2 )

Publication subTitle :From Algorithms to Applications

Publication series :2

Author: Frenkel   Daan;Smit   Berend  

Publisher: Elsevier Science‎

Publication year: 2001

E-ISBN: 9780080519982

P-ISBN(Paperback): 9780122673511

P-ISBN(Hardback):  9780122673511

Subject: O411.1 Mathematical Methods of Physics

Language: ENG

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Description

Understanding Molecular Simulation: From Algorithms to Applications explains the physics behind the "recipes" of molecular simulation for materials science. Computer simulators are continuously confronted with questions concerning the choice of a particular technique for a given application. A wide variety of tools exist, so the choice of technique requires a good understanding of the basic principles. More importantly, such understanding may greatly improve the efficiency of a simulation program. The implementation of simulation methods is illustrated in pseudocodes and their practical use in the case studies used in the text.

Since the first edition only five years ago, the simulation world has changed significantly -- current techniques have matured and new ones have appeared. This new edition deals with these new developments; in particular, there are sections on:

  • Transition path sampling and diffusive barrier crossing to simulaterare events
  • Dissipative particle dynamic as a course-grained simulation technique
  • Novel schemes to compute the long-ranged forces
  • Hamiltonian and non-Hamiltonian dynamics in the context constant-temperature and constant-pressure molecular dynamics simulations
  • Multiple-time step algorithms as an alternative for constraints
  • Defects in solids
  • The pruned-enriched Rosenbluth sampling, recoil-growth, and concerted rotations for complex molecules
  • Parallel tempering for

Chapter

Front Cover

pp.:  1 – 4

Copyright Page

pp.:  5 – 6

Contents

pp.:  6 – 14

Preface to the Second Edition

pp.:  14 – 16

Preface

pp.:  16 – 20

List of Symbols

pp.:  20 – 24

Chapter 1. Introduction

pp.:  24 – 30

Part I: Basics

pp.:  30 – 132

Part II: Ensembles

pp.:  132 – 188

Part III: Free Energies and Phase Equilibria

pp.:  188 – 312

Part IV: Advanced Techniques

pp.:  312 – 502

Part V: Appendices

pp.:  502 – 612

Bibliography

pp.:  612 – 642

Author Index

pp.:  642 – 651

Index

pp.:  651 – 662

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