Segmented Negative Strand Viruses :Arenaviruses, Bunyaviruses, and Orthomyxoviruses

Publication subTitle :Arenaviruses, Bunyaviruses, and Orthomyxoviruses

Author: Compans   Richard W.  

Publisher: Elsevier Science‎

Publication year: 2013

E-ISBN: 9781483273372

P-ISBN(Paperback): 9780121835019

P-ISBN(Hardback):  9780121835019

Subject: Q11 biological evolution and development

Language: ENG

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Description

Segmented Negative Strand Viruses: Arenaviruses, Bunyaviruses, and Orthomyxoviruses is a collection of proceedings presented at the 5th International Symposium on Negative Strand Viruses, held at Hilton Head, South Carolina, on September 11-17, 1983. The papers focus on three virus families with segmented negative RNA genomes: arenaviruses, bunyaviruses, and orthomyxoviruses. Emphasis is placed on the viruses' replication strategies, gene organization, and biochemical and biological properties.

Comprised of 56 chapters, this volume begins with an introduction to the genome structure, transcription, and genetics of arenaviruses, bunyaviruses, and orthomyxoviruses. The next section is devoted to these viruses' gene expression, protein synthesis, and protein modification. Eukaryotic expression of cloned complementary DNA coding for influenza is considered, along with the functional expression and mutational analysis of influenza virus surface glycoproteins. Subsequent chapters explore viral proteins via antigenic and functional analyses; the biology and immunochemistry of the African arenaviruses Lassa and Mopeia; and the use of avian-human reassortant influenza A viruses as live vaccine viruses in humans.

This book will be of interest to investigators, microbiologists, and molecular and cell biologists in fields such as molecular biology, genetics, viral immunology, infectious diseases, and vaccine development.

Chapter

Contents of Nonsegmented Negative Strand Viruses

Part I: Genome Structure, Transcription, and Genetics

CHAPTER 1. CODING ANALYSES OF BUNYAVIRUS RNA SPECIES

CODING ASSIGNMENTS OF BUNYAVIRUS VIRAL RNA SPECIES

CONSERVED REGIONS OF BUNYAVIRUS S RNA SEQUENCES

COMPARISON OF AINO BUNYAVIRUS S RNA GENE PRODUCTS TO THOSE OF SSH AND LAC BUNYAVIRUSES

ANALYSES OF S MESSENGER AND OTHER S PLUS SENSE RNA SPECIES OF SSH BUNYAVIRUS

REFERENCES

CHAPTER 2. MOLECULAR CLONING OF THE BUNYAMWERA VIRUS GENOME

CDNA CLONING

CHARACTERIZATION OF RECOMBINANT PLASMIDS

IDENTIFICATION OF INFECTED CELL SPECIFIC RNA SPECIES

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 4. HYBRID SELECTION OF VIRAL mRNA USING cDNA CLONES OF INKOO VIRUS M GENE

REFERENCES

CHAPTER 5. RIFT VALLEY FEVER VIRUS INTRACELLULAR RNA: A FUNCTIONAL ANALYSIS

VIRION STRUCTURAL COMPONENTS AND INTRACELLULAR PROTEIN SYNTHESIS

RNA FUNCTION

REFERENCES

CHAPTER 6. TRANSCRIPTION OF THE S RNA SEGMENT OF GERMISTON BUNYAVIRUS

STRUCTURAL ANALYSIS

VIRUS-INDUCED PROTEIN SYNTHESIS

SYNTHESIS OF INTRACELLULAR RNAs

DISCUSSION

REFERENCES

CHAPTER 7. THE S SEGMENT OF BUNYAVIRUSES CODES FOR TWO COMPLEMENTARY RNAs

FOUR COMPLEMENTARY RNAs IN BUNYAVIRUS-INFECTED CELLS

CODING ORIGINS OF THE FOUR cRNA SPECIES

ACKNOWLEDGMENT

REFERENCES

CHAPTER 8. RESTRICTION OF SUB-UNIT REASSORTMENT IN THE BUNYAVIRIDAE

GENOTYPING BY DOT HYBRIDISATION

PROGENY ANALYSIS

ACKNOWLEDGEMENT

REFERENCES

CHAPTER 9. GENETIC ANALYSES OF PICHINDE AND LCM ARENAVIRUSES; EVIDENCE FOR A UNIQUE ORGANIZATION FOR PICHINDE S RNA

VIRUS GENOME RNA AND CODING STRATEGY

MOLECULAR CLONING PICHINDE S RNA SPECIES

NUCLEOTIDE SEQUENCES AND PREDICTED GENE PRODUCTS

THE INTERGENIC REGION OF PICHINDE S RNA

GENETIC ATTRIBUTES OF PICHINDE AND LCM VIRUSES

REFERENCES

CHAPTER 10. STUDIES ON THE MOLECULAR BIOLOGY OF LYMPHOCYTIC CHORIOMENINGITIS VIRUS1

RATIONALE FOR MOLECULAR STUDIES

STRATEGY FOR CLONING LCMV VIRION RNAS

IDENTIFICATION OF LCMV cDNA CLONES

IDENTIFICATION OF 3' SPECIFIC cDNA CLONES AND NUCLEOTIDE SEQUENCING

COMPARISON OF LCMV S GENOM IC SEQUENCES

CONCLUDING REMARKS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 11. SEQUENCE REARRANGEMENTS IN INFLUENZA VIRUS RNA AND RIBONUCLEOPROTEIN STRUCTURE

SUBGENOMIC RNAs

CLASSIFICATION OF sgRNAs

A JUMPING POLYMERASE?

ELECTRON MICROSCOPY OF RNPs

MODEL FOR RNP STRUCTURE

CONCLUSION

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 12. MOLECULAR TOPOGRAPHY OF THE INFLUENZA VIRUS P PROTEIN COMPLEX DURING CAPPED RNA-PRIMED MESSENGER RNA SYNTHESIS

INTRODUCTION

RESULTS

DISCUSSION

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 13. IN VIVO TRANSCRIPTION AND TRANSLATION OF DEFECTIVE-INTERFERING PARTICLE-SPECIFIC RNAS OF INFLUENZA VIRUS

TRANSCRIPTION OF DI RNAS IN STANDARD AND DI-INFECTED CELLS

TRANSLATION OF STANDARD VIRAL AND DI-SPECIFIC POLYPEPTIDES

SUMMARY

REFERENCES

CHAPTER 14. MUTANTS OBTAINED FOLLOWING UNDILUTED PASSAGE OF AN INFLUENZA A (FOWL PLAGUE) VIRUS

INTRODUCTION

MATERIAL AND METHODS

FREQUENCIES OF TS MUTATIONS IN THE VARIOUS GENES

INTRINSIC INTERFERENCE BY MUTATION

ALTERATION OF GLYCOSYLATION BY MUTATION

CONCLUSION

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 15. GENETIC STABILITY OF A/ANN ARBOR/6/60 COLD-MUTANT(TEMPERATURE-SENSITIVE) LIVE INFLUENZA VACCINE STRAINS

INTRODUCTION

RESULTS

DISCUSSION

ACKNOWLEDGEMENTS

REFERENCES

Part II: Gene Expression, Protein Synthesis, and Protein Modification

CHAPTER 16. SUBGENOMIC RNA OF ARENAVIRUS PICHINDE AND ITS IMPLICATION IN REGULATION OF VIRAL GENE EXPRESSION IN PRODUCTIVE INFECTION AND PERSISTENCE

GENE MAPPING OF PICHINDE VIRUS

GENOME ORGANIZATION OF PICHINDE VIRUS

HYPOTHESIS OF SUBGENOMIC RNA AMPHIFICATION

REFERENCES

CHAPTER 17. BIOCHEMICAL CHARACTERIZATION OF HANTAAN VIRUS

VIRUSES

VIRION RNA

VIRAL PROTEINS

SUMMARY

REFERENCES

CHAPTER 18. EUKARYOTIC EXPRESSION OF CLONED cDNA CODING FOR INFLUENZA VIRAL GLYCOPROTEINS USING AN SV40 VECTOR: USE OF RECOMBINANT DNA MUTANTS TO STUDY STRUCTURE-FUNCTION RELATIONSHIPS1

SV40 AS AN EXPRESSION VECTOR

REFERENCES

CHAPTER 19. STUDIES ON THE SECOND PROTEIN ENCODED BY THE NEURAMINIDASE GENE OF INFLUENZA B VIRUS

SYNTHESIS OF NB IN INFECTED CELLS

ANTIBODIES TO NB IN SERUM FROM INFECTED MICE

STRUCTURAL FEATURES OF NB

CONCLUSIONS

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 20. FUNCTIONAL EXPRESSION AND MUTATIONAL ANALYSIS OF INFLUENZA VIRUS SURFACE GLYCOPROTEINS

INTRODUCTION

ACKNOWLEGEMENTS

REFERENCES

CHAPTER 21. THE NONSTRUCTURAL GENE SEGMENT OF INFLUENZA A VIRUS: EXPRESSION OF NS1 PROTEIN IN MAMMALIAN CELLS; ANALYSIS OF A DELETION MUTANT

INTRODUCTION

EXPRESSION OF NS1 IN MAMMALIAN CELLS

ANALYSIS OF A DELETION MUTANT

SUMMARY AND DISCUSSION

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 22. PRODUCTION OF A SUBUNIT VACCINE FOR RIFT VALLEY FEVER VIRUS

REFERENCES

CHAPTER 23. PERSISTENT EXPRESSION OF INFLUENZA VIRUS NUCLEOPROTEIN IN RECOMBINANT DNA TRANSFECTED MOUSE CELLS

INTRODUCTION

RESULTS AND DISCUSSION

REFERENCES

CHAPTER 24. EXPRESSION OF INFLUENZA VIRUS SUBGENOMIC VIRION RNAs IN INFECTED CELLS

ISOLATION OF TS MUTANTS THAT INDUCE THE SYNTHESIS OF NOVEL POLYPEPTIDES

TRANSLATION IN VITRO OF RNA FROM tsC-INFECTED CELLS

IDENTIFICATION OF tsC-SPECIFIC SUBGENOMIC RNAs

CONCLUSION

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 25. TRANSPORT OF VIRAL GLYCOPROTEINS AND ITS MODULATION BY MONENSIN

APPEARANCE OF NEWLY-SYNTHESIZED HEMAGGLUTININ AT THE APICAL SURFACE OF INFLUENZA VIRUS-INFECTED CELLS

CHAPTER 26. TRANSPORT OF VIRAL MEMBRANE GLYCOPROTEINS IN DOUBLY-INFECTED CELLS

EFFECT OF MONENSIN ON ENVELOPED VIRUSES THAT FORM AT INTRACELLULAR MEMBRANES

CONCLUSIONS

REFERENCES

CHAPTER 27. INTERFERING WITH GLYCOPROTEIN PROCESSING IN INFLUENZA AND SINDBIS VIRUS-INFECTED CELLS

ACKNOWLEDGEMENTS

REFERENCES

Part III: Viral Proteins: Antigenic and Functional Analyses

CHAPTER 28. ANTIGENIC AND STRUCTURAL STUDIES ON THE GLYCOPROTEINS OF LYMPHOCYTIC CHORIOMENINGITIS VIRUS

MONOCLONAL ANTIBODIES TO LCMV GLYCOPROTEINS

EXPRESSION OF LCMV GLYCOPROTEINS DURING INFECTION

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 29. COMPARATIVE ANALYSIS OF LASSA AND LASSA-LIKE ARENAVIRUS ISOLATES FROM AFRICA

VIRUS STRAINS

VIRION PROTEINS

T1 OLIGONUCLEOTIDE MAPPING

PEPTIDE MAPPING

DISCUSSION

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 30. NEUTRALIZATION OF ARENAVIRUSES: REACTION OF TACARIBE VIRUS AND VARIANTS WITH MONOCLONAL ANTIBODIES

RESULTS

DISCUSSION

Acknowledgements

References

CHAPTER 31. ANTIGENIC SITES ON THE G1 GLYCOPROTEIN OF LA CROSSE VIRUS THAT ARE INVOLVED IN NEUTRALIZATION

TOPOLOGICAL MAPPING OF ANTIGENIC SITES ON G

PHYSICAL MAPPING OF THE EPITOPES ON G

HIGHER ORDER STRUCTURE OF G

MODEL OF LOCATION OF EPITOPES ON THE G1 GLYCOPROTEIN

NEUTRALIZATION KINETICS AND ENHANCEMENT OF NEUTRALIZATION

CONCLUSIONS

REFERENCES

CHAPTER 32. INFLUENZA VIRUS NEURAMINIDASE: STRUCTURE AND VARIATION

ANTIGENIC VARIATION IN THE NEURAMINIDASE

SEQUENCE CHANGES IN THE NEURAMINIDASE OF 'MONOCLONAL VARIANTS'

THREE DIMENSIONAL STRUCTURE OF N2 NEURAMINIDASE HEADS

REFERENCES

CHAPTER 33. PLEIOTROPIC EFFECTS OF A SINGLE AMINO ACID CHANGE ON ANTIGENICITY AND BIOLOGIC FUNCTION OF SWINE INFLUENZA. VIRUS HEMAGGLUTININ MUTANTS

MATERIALS AND METHODS

RESULTS AND DISCUSSION

SELECTION AND PHENOTYPIC CHARACTERIZATION OF L AND H REVERTANT VIRUSES

SUMMARY

REFERENCES

CHAPTER 34. SELECTION OF RECEPTOR VARIANTS FROM HUMAN AND AVIAN INFLUENZA ISOLATES WITH THE H3 HEMAGGLUTININ

SELECTION OF RECEPTOR VARIANTS WITH GLYCOPROTEIN INHIBITORS OF INFECTION

SELECTION OF RECEPTOR VARIANTS BY ADSORPTION TO DERIVATIZED ERYTHROCYTES

DISCUSSION

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 35. ANTIGENIC ALTERATIONS OF THE INFLUENZA VIRUS HEMAGGLUTININ DURING THE INFECTIOUS CYCLE

ROLES OF THE HEMAGGLUTININ IN THE INFECTIOUS CYCLE

IMMUNOFLUORESCENCE OF INFLUENZA VIRUS HEMAGGLUTININ IN MDCK CELLS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 36. ANTIGENIC DRIFT OF THE H1 SUBTYPE HAEMAGGLUTININ FROM 1977 TO 1980

EVOLUTION OF H1N1 SUBTYPE FIELD STRAINS

ANTIGENIC FEATURES OF THE H1 SUBTYPE

SUMMARY

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 37. THE BINDING SITES TO MONOCLONAL ANTIBODIES ON A/USSR/90/77(H1N1) HEMAGGLUTININ

ANTIGENIC VARIANTS SELECTED IN VITRO

CLONING OF THE RECOMBINANT DNA

BIOHAZARD CONSIDERATIONS

NUCLEOTIDE SEQUENCE OF THE CLONED DNA

NUCLEOTIDE SEQUENCE OF THE HA1 GENE OF THE MONOCLONAL VARIANTS

AMINO ACID SUBSTITUTION IN VARIANT CLONES

CHAPTER 38. AMINO ACID CHANGES ASSOCIATED WITH EPITOPE 264

AMINO ACID CHANGES ASSOCIATED WITH OTHER EPITOPES

BINDING SITES TO MONOCLONAL ANTIBODIES ON A/USSR/90/77 HA

ACKNOWLEDGMENT

REFERENCES

CHAPTER 39. SEQUENCE CHANGES IN THE HEMAGGLUTININ OF AN ENTEROTROPIC H3 INFLUENZA VIRUS

GENETIC ANALYSIS

BIOLOGICAL ANALYSIS

ANTIGENIC ANALYSIS

SEQUENCE ANALYSIS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 40. STRUCTURE OF THE CLEAVAGE SITE OF HEMAGGLUTININS OF PATHOGENIC AND NONPATHOGENIC H7 INFLUENZA VIRUSES*

BIOLOGICAL ACTIVATION OF HEMAGGLUTININS

NUCLEOTIDE SEQUENCING OF THE CONNECTING PEPTIDE REGION OF H7 and H5 HEMAGGLUTININS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 41. AN INFLUENZA VIRUS MUTANT WHOSE LESION RESULTS IN TEMPERATURE SENSITIVE HAEMAGGLUTINATION

SENSITIVITY TO GROWTH IN HORSE SERUM

SEQUENCE ANALYSIS OF GENE 4 OF TS C US4

ANALYSIS OF RECOMBINANTS

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 42. THE CARBOHYDRATES OF THE HEMAGGLUTININ OF INFLUENZA VIRUS

THE STRUCTURE OF THE OLIGOSACCHARIDES OF THE FPV HEMAGGLUTININ

FACTORS DETERMINING THE GLYCOSYLATION PATTERN OF THE HEMAGGLUTININ

REFERENCES

CHAPTER 43. HETEROGENEITY OF THE MEMBRANE (M1) PROTEIN OF INFLUENZA VIRUS

THE MEMBRANE (M) COMPONENT AND VIRUS ASSEMBLY

TWO FORMS OF M1 IN INFLUENZA VIRUS

M1 IS A PHOSPHOPROTEIN

REFERENCES

CHAPTER 44. Antigenic Characterization of Influenza A Matrix Protein with Monoclonal Antibodies

PRODUCTION OF MONOCLONAL ANTIBODIES

ANTIGENIC VARIATION IN THREE MATRIX PROTEIN DETERMINANTS

NUMBER OF NON-OVERLAPPING ANTIGENIC DOMAINS ON MATRIXPROTEIN

Acknowledgements

REFERENCES

CHAPTER 45. EVOLUTIONARY CONSERVATION OF INFLUENZA NUCLEOPROTEIN GENES IN HOST SPECIES

COMPARISON OF INFLUENZA GENES BETWEEN HOST SPECIES

HYBRIDIZATION ANALYSIS OF THE NP GENES OF INFLUENZA STRAINS FROM DIFFERENT HOSTS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 46. VIRUS-SPECIFIC POLYPEPTIDES IN CELLS INFECTED WITH INFLUENZA C, DHORI, AND THOGOTO VIRUSES

INTRODUCTION

INFLUENZA C VIRUS

DHORI VIRUS

THOGOTO VIRUS

ACKNOWLEDGEMENTS

REFERENCES

Part IV: Biology

CHAPTER 47. MECHANISM OF PERSISTENT LCMV INFECTION IN MICE: ROLE OF LCMV VARIANTS IN SUPPRESSION OF LCMV SPECIFIC CYTOTOXIC T CELL RESPONSE AND MAINTENANCE OF THE CARRIER STATE

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 48. THE AFRICAN ARENAVIRUSES LASSA AND MOPEIA: BIOLOGICAL AND IMMUNOCHEMICAL COMPARISONS

ORIGIN OF VIRUS STRAINS

EXPERIMENTAL INFECTIONS WITH LASSA AND MOPEIA VIRUSES

IMMUNOCHEMICAL DIFFERENTIATION OF LASSA AND MOPEIA VIRUSES

SIZE HETEROGENEITY OF STRUCTURAL PROTEINS

CONCLUSIONS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 49. REPLICATION OF BUNYAVIRUSES IN A XENOPUS LAEVIS CELL LINE

GROWTH OF BUNYAVIRUSES IN XTC-2 CELLS

PROTEIN SYNTHESIS IN BUNYAVIRUS-INFECTED CELLS

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 50. INTERACTION OF NEUTRALIZED INFLUENZA VIRUS WITH AVIAN AND MAMMALIAN CELLS

ASSOCIATION OF NEUTRALIZED FPV WITH AVIAN AND MAMMALIAN CELLS

ACCUMULATION OF VIRION RNA IN NUCLEI

REFERENCES

CHAPTER 51. RESTRICTED MOBILITY OF INFLUENZA HEMAGGLUTININ ON HELA CELL PLASMA MEMBRANES

INFLUENZA HEMAGGLUTININ IS IMMOBILE ON HELA CELL SURFACES

ROLE OF CYTOSKELETAL COMPONENTS

MOBILITY OF HA INSERTED INTO HELA CELL SURFACES BY VESICLE FUSION

CONCLUSIONS

REFERENCES

CHAPTER 52. REASSEMBLY OF MEMBRANOUS PARTICLES WITH INFLUENZA VIRUS HEMAGGLUTININ AND RESTORATION OF BIOLOGICAL AND IMMUNOLOGICAL ACTIVITIES

Influenza virus hemolysis and cell fusion

Properties of lipid-free hemagglutinins

Reassembly of virosomes of influenza virus hemagglutinins

Elicitation of memory CTL with virosomes

Conclusion

Acknowledgments

References

CHAPTER 53. INCORPORATlON OF M-PROTElN OF INFLUENZA VIRUS INTO LIPOSOMES. FURTHER CHARACTRIZATION OF LlPOSCMAL STRUCIURES

FORMATION OF LlPOSOMES CONTAINlNG M-PROIEIN

ELECTRON MICROSCOPIC ANALYSIS OF M-PROTEIN LIPOSOMES

IMMUNOLOGIC PROPERTIES OF M-PROTEIN

APPLICATION OF LIPOSOMAL CONSTRUCTIONS

ACKNOWLEDGMENTS

REFERENCES

CHAPTER 54. IN VITRO AND IN VIVO PROPERTIES OF AN INFLUENZA A HOST RANGE VIRUS

HOST RANGE PHENOTYPE AND GENOTYPE

VIRUSES AND VIRUS CULTURE

VIRUS GROWTH CURVE

RELEASE OF VIRUS PARTICLES FROM INFECTED CELLS

INTRACELLULAR VIRAL PROTEIN PRODUCTION

SUMMARY

ACKNOWLEDGEMENTS

REFERENCES

CHAPTER 55. SELF-INACTIVATION OF INFLUENZA A VIRUS AND AUTOLYSIS OF THE VIRUS-INFECTED CELLS

SELF-INACTIVATION OF INFLUENZA A VIRUS AT LOW pH

AUTO LYSIS OF VIRUS-INFECTED CELL

A PLAUSIBLE FUNCTION OF HA IN MEMBRANE FUSION

REFERENCES

CHAPTER 56. USE OF AVIAN-HUMAN REASSORTANT INFLUENZA A VIRUSES AS LIVE VACCINE VIRUSES IN MAN

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